Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4810 domain-containing protein | DW204_11270 | Not Available | Negative | 2669789 - 2670133 | 13368.2 |
| hypothetical protein | DW204_11275 | Not Available | Negative | 2670133 - 2670471 | 12392.3 |
| penicillin-binding protein activator lpob | DW204_11280 | Not Available | Negative | 2670474 - 2671409 | 33511.0 |
| pyruvate, phosphate dikinase | DW204_11285 | Not Available | Negative | 2671571 - 2674297 | 100658.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DW204_11290 | Not Available | Positive | 2674510 - 2675928 | 54005.8 |
| rlua family pseudouridine synthase | DW204_11295 | Not Available | Positive | 2675970 - 2676896 | 35904.6 |
| had family phosphatase | DW204_11300 | Not Available | Positive | 2676906 - 2677532 | 23656.0 |
| hypothetical protein | DW204_11305 | Not Available | Positive | 2677746 - 2678147 | 16027.6 |
| f0f1 atp synthase subunit gamma | DW204_11310 | Not Available | Negative | 2678351 - 2679238 | 32751.5 |
| f0f1 atp synthase subunit alpha | DW204_11315 | Not Available | Negative | 2679244 - 2680833 | 57288.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

