Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DW204_11220 | Not Available | Negative | 2660870 - 2662384 | 55759.0 |
| elongation factor ts | DW204_11225 | Not Available | Negative | 2662572 - 2663564 | 35577.9 |
| 30s ribosomal protein s2 | DW204_11230 | Not Available | Negative | 2663686 - 2664525 | 30649.1 |
| 30s ribosomal protein s9 | DW204_11235 | Not Available | Negative | 2664735 - 2665121 | 14481.8 |
| 50s ribosomal protein l13 | DW204_11240 | Not Available | Negative | 2665128 - 2665589 | 16980.8 |
| duf4488 domain-containing protein | DW204_11245 | Not Available | Negative | 2665871 - 2666362 | 18666.6 |
| duf2007 domain-containing protein | DW204_11250 | Not Available | Positive | 2666629 - 2667309 | 26014.5 |
| adp-ribosylglycohydrolase family protein | DW204_11255 | Not Available | Positive | 2667396 - 2668190 | 29011.2 |
| hypothetical protein | DW204_11260 | Not Available | Negative | 2668343 - 2668918 | 21952.9 |
| hypothetical protein | DW204_11265 | Not Available | Negative | 2669121 - 2669792 | 24620.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

