Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_11170 | Not Available | Negative | 2649836 - 2650786 | 36727.6 |
| hypothetical protein | DW204_11175 | Not Available | Negative | 2650811 - 2652964 | 81025.8 |
| mfs transporter araj | DW204_11180 | Not Available | Negative | 2652974 - 2654155 | 42507.5 |
| m48 family peptidase | DW204_11185 | Not Available | Negative | 2654244 - 2654951 | 27212.3 |
| duf4250 domain-containing protein | DW204_11190 | Not Available | Positive | 2655060 - 2655236 | 6910.36 |
| class ii fructose-1,6-bisphosphate aldolase | DW204_11195 | Not Available | Negative | 2655315 - 2656319 | 36573.7 |
| type b 50s ribosomal protein l31 | DW204_11200 | Not Available | Positive | 2656667 - 2656921 | 9609.51 |
| glycoside hydrolase family 95 protein | DW204_11205 | Not Available | Positive | 2657242 - 2659671 | 90966.7 |
| elongation factor p | DW204_11210 | Not Available | Negative | 2659757 - 2660323 | 21347.6 |
| 50s ribosomal protein l34 | DW204_11215 | Not Available | Positive | 2660514 - 2660675 | 6201.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

