Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DW204_11120 | Not Available | Positive | 2633015 - 2634139 | 41018.6 |
| pyrroline-5-carboxylate reductase | DW204_11125 | Not Available | Positive | 2634487 - 2635260 | 27186.0 |
| mate family efflux transporter | DW204_11130 | Not Available | Negative | 2635350 - 2636699 | 49243.0 |
| alpha-n-acetylglucosaminidase | DW204_11135 | Not Available | Positive | 2636877 - 2639045 | 83520.6 |
| duf5009 domain-containing protein | DW204_11140 | Not Available | Positive | 2639074 - 2640141 | 39973.5 |
| tonb-dependent receptor | DW204_11145 | Not Available | Positive | 2640172 - 2643162 | 109317.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_11150 | Not Available | Positive | 2643187 - 2644830 | 62055.5 |
| glycoside hydrolase family 92 protein | DW204_11155 | Not Available | Positive | 2644987 - 2647314 | 88734.5 |
| glycoside hydrolase family 28 protein | DW204_11160 | Not Available | Positive | 2647339 - 2648739 | 51533.3 |
| response regulator | DW204_11165 | Not Available | Negative | 2648831 - 2649775 | 35687.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

