Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_11065 | Not Available | Negative | 2620588 - 2622114 | 57356.9 |
| hypothetical protein | DW204_11070 | Not Available | Negative | 2622098 - 2623156 | 41805.9 |
| glycosyl transferase | DW204_11075 | Not Available | Negative | 2623153 - 2624052 | 35689.1 |
| duf4374 domain-containing protein | DW204_11085 | Not Available | Positive | 2626165 - 2627586 | 51695.2 |
| pepsy domain-containing protein | DW204_11090 | Not Available | Positive | 2627596 - 2628720 | 42309.6 |
| class i sam-dependent methyltransferase | DW204_11095 | Not Available | Negative | 2628710 - 2629435 | 27397.9 |
| arginine repressor | DW204_11100 | Not Available | Positive | 2629608 - 2630090 | 18098.9 |
| n-acetyltransferase | DW204_11105 | Not Available | Positive | 2630107 - 2630676 | 21150.6 |
| argininosuccinate synthase | DW204_11110 | Not Available | Positive | 2630754 - 2631962 | 44976.6 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DW204_11115 | Not Available | Positive | 2631959 - 2632927 | 35932.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

