Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | DW204_10965 | Not Available | Negative | 2596755 - 2597696 | 36244.6 |
| penicillin-binding protein | DW204_10970 | Not Available | Positive | 2597890 - 2600217 | 88559.0 |
| upxy family transcription antiterminator | DW204_10975 | Not Available | Negative | 2600305 - 2600820 | 20060.7 |
| gdp-l-fucose synthase | DW204_10980 | Not Available | Negative | 2600826 - 2601944 | 41937.4 |
| gdp-mannose 4,6-dehydratase | DW204_10985 | Not Available | Negative | 2601961 - 2603055 | 41271.1 |
| rpn family recombination-promoting nuclease/putative transposase | DW204_10990 | Not Available | Negative | 2603165 - 2604034 | 33557.0 |
| hypothetical protein | DW204_10995 | Not Available | Positive | 2604294 - 2604842 | 19928.8 |
| lyttr family transcriptional regulator | DW204_11000 | Not Available | Positive | 2605024 - 2605503 | 18593.5 |
| hypothetical protein | DW204_11005 | Not Available | Positive | 2605546 - 2608734 | 117840.0 |
| hypothetical protein | DW204_11010 | Not Available | Positive | 2608658 - 2610574 | 71216.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

