Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | DW204_10915 | Not Available | Negative | 2586172 - 2588031 | 71382.1 |
| ctp synthase | DW204_10920 | Not Available | Negative | 2588061 - 2589659 | 60032.2 |
| duf3078 domain-containing protein | DW204_10925 | Not Available | Positive | 2589999 - 2591465 | 56666.3 |
| trimeric intracellular cation channel family protein | DW204_10930 | Not Available | Positive | 2591494 - 2592111 | 22547.4 |
| monofunctional biosynthetic peptidoglycan transglycosylase | DW204_10935 | Not Available | Negative | 2592123 - 2592818 | 26819.2 |
| ompa family protein | DW204_10940 | Not Available | Negative | 2592901 - 2593617 | 24302.8 |
| serine hydroxymethyltransferase | DW204_10945 | Not Available | Negative | 2593642 - 2594922 | 47048.7 |
| port family protein | DW204_10950 | Not Available | Negative | 2594953 - 2595690 | 27836.7 |
| flavin reductase family protein | DW204_10955 | Not Available | Negative | 2595698 - 2596264 | 21217.8 |
| aspartate carbamoyltransferase regulatory subunit | DW204_10960 | Not Available | Negative | 2596268 - 2596726 | 17358.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

