Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW204_10855 | Not Available | Negative | 2573430 - 2575739 | 87469.5 |
| sensor histidine kinase | DW204_10860 | Not Available | Positive | 2575842 - 2577245 | 53343.7 |
| dna-binding response regulator | DW204_10865 | Not Available | Positive | 2577256 - 2577957 | 26413.3 |
| low specificity l-threonine aldolase | DW204_10870 | Not Available | Positive | 2577977 - 2579011 | 38296.0 |
| gamma carbonic anhydrase family protein | DW204_10875 | Not Available | Negative | 2579088 - 2579618 | 18934.7 |
| hypothetical protein | DW204_10890 | Not Available | Negative | 2582017 - 2582205 | 7572.29 |
| Trna-pro | Not Available | Not Available | Positive | 2582586 - 2582663 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 2582699 - 2582773 | Not Available |
| s9 family peptidase | DW204_10905 | Not Available | Negative | 2582996 - 2585086 | 78906.9 |
| ion transporter | DW204_10910 | Not Available | Negative | 2585146 - 2586036 | 34158.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

