Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction endonuclease subunit r | DW204_00940 | Not Available | Positive | 257272 - 260502 | 124127.0 |
| m48 family peptidase | DW204_00945 | Not Available | Positive | 260532 - 261194 | 26346.3 |
| phosphoribosylformylglycinamidine synthase | DW204_00950 | Not Available | Positive | 261324 - 265031 | 137441.0 |
| ahpc/tsa family protein | DW204_00955 | Not Available | Negative | 265227 - 266402 | 43606.6 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_00960 | Not Available | Negative | 266411 - 267826 | 53451.7 |
| susc/raga family tonb-linked outer membrane protein | DW204_00965 | Not Available | Negative | 267852 - 271070 | 121442.0 |
| helix-turn-helix domain-containing protein | DW204_00970 | Not Available | Negative | 271267 - 273039 | 68409.4 |
| branched-chain amino acid aminotransferase | DW204_00975 | Not Available | Positive | 273453 - 274472 | 37873.2 |
| arginase family protein | DW204_00980 | Not Available | Negative | 274554 - 275345 | 30160.4 |
| Trna-trp | Not Available | Not Available | Positive | 275477 - 275552 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

