Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DW204_10745 | Not Available | Positive | 2552731 - 2555748 | 114693.0 |
| tonb-dependent receptor | DW204_10750 | Not Available | Positive | 2555750 - 2557411 | 62311.7 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DW204_10755 | Not Available | Negative | 2557414 - 2558454 | 38585.0 |
| peptide chain release factor n(5)-glutamine methyltransferase | DW204_10760 | Not Available | Positive | 2558487 - 2559329 | 32091.5 |
| recx family transcriptional regulator | DW204_10765 | Not Available | Positive | 2559326 - 2559805 | 19078.9 |
| comf family protein | DW204_10770 | Not Available | Positive | 2559789 - 2560478 | 25599.4 |
| orotate phosphoribosyltransferase | DW204_10775 | Not Available | Positive | 2560580 - 2561215 | 23330.3 |
| srpbcc family protein | DW204_10780 | Not Available | Positive | 2561344 - 2561772 | 16384.2 |
| argininosuccinate lyase | DW204_10785 | Not Available | Positive | 2561813 - 2563153 | 50611.3 |
| Trna-gly | Not Available | Not Available | Positive | 2563230 - 2563302 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

