Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DW204_10695 | Not Available | Positive | 2538120 - 2539769 | 59851.8 |
| susc/raga family tonb-linked outer membrane protein | DW204_10700 | Not Available | Positive | 2539810 - 2541255 | 53711.7 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_10705 | Not Available | Positive | 2541274 - 2542824 | 57400.6 |
| susf/suse family outer membrane protein | DW204_10710 | Not Available | Positive | 2542844 - 2544361 | 56668.3 |
| cycloisomaltooligosaccharide glucanotransferase | DW204_10715 | Not Available | Positive | 2544382 - 2546181 | 67843.9 |
| glycoside hydrolase family 97 protein | DW204_10720 | Not Available | Positive | 2546196 - 2548352 | 81860.6 |
| duf4968 domain-containing protein | DW204_10725 | Not Available | Positive | 2548534 - 2551020 | 95166.6 |
| duf4491 family protein | DW204_10730 | Not Available | Negative | 2551130 - 2551447 | 12355.3 |
| asnc family transcriptional regulator | DW204_10735 | Not Available | Negative | 2551447 - 2551917 | 17477.3 |
| nudix domain-containing protein | DW204_10740 | Not Available | Positive | 2552192 - 2552722 | 19819.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

