Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | DW204_10640 | Not Available | Positive | 2525989 - 2526594 | 22605.4 |
| dna-directed rna polymerase subunit alpha | DW204_10645 | Not Available | Positive | 2526606 - 2527598 | 37536.1 |
| 50s ribosomal protein l17 | DW204_10650 | Not Available | Positive | 2527602 - 2528096 | 18266.0 |
| sufe family protein | DW204_10655 | Not Available | Negative | 2528276 - 2528707 | 16351.7 |
| glutamine cyclotransferase | DW204_10660 | Not Available | Negative | 2528723 - 2529721 | 37089.4 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DW204_10665 | Not Available | Negative | 2529803 - 2531572 | 66039.2 |
| hypothetical protein | DW204_10670 | Not Available | Negative | 2531755 - 2533368 | 61073.5 |
| phosphate butyryltransferase | DW204_10675 | Not Available | Positive | 2533569 - 2534489 | 33487.7 |
| butyrate kinase | DW204_10680 | Not Available | Positive | 2534501 - 2535577 | 39052.9 |
| hypothetical protein | DW204_10690 | Not Available | Positive | 2536310 - 2537905 | 62290.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

