Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l18 | DW204_10590 | Not Available | Positive | 2521014 - 2521355 | 12601.5 |
| 30s ribosomal protein s5 | DW204_10595 | Not Available | Positive | 2521359 - 2521877 | 17939.0 |
| 50s ribosomal protein l30 | DW204_10600 | Not Available | Positive | 2521889 - 2522065 | 6489.21 |
| 50s ribosomal protein l15 | DW204_10605 | Not Available | Positive | 2522096 - 2522542 | 15613.9 |
| preprotein translocase subunit secy | DW204_10610 | Not Available | Positive | 2522547 - 2523893 | 49166.4 |
| type i methionyl aminopeptidase | DW204_10615 | Not Available | Positive | 2523910 - 2524707 | 29237.3 |
| translation initiation factor if-1 | DW204_10620 | Not Available | Positive | 2524709 - 2524927 | 8235.14 |
| 50s ribosomal protein l36 | DW204_10625 | Not Available | Positive | 2524943 - 2525059 | 4586.82 |
| 30s ribosomal protein s13 | DW204_10630 | Not Available | Positive | 2525093 - 2525473 | 14149.3 |
| 30s ribosomal protein s11 | DW204_10635 | Not Available | Positive | 2525482 - 2525871 | 13878.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

