Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-hexosaminidase | DW204_10435 | Not Available | Positive | 2497913 - 2499544 | 61930.7 |
| radical sam mobile pair protein b | DW204_10445 | Not Available | Negative | 2499722 - 2500597 | 34030.1 |
| mbl fold metallo-hydrolase | DW204_10450 | Not Available | Negative | 2500824 - 2501600 | 28986.2 |
| arac family transcriptional regulator | DW204_10455 | Not Available | Positive | 2501727 - 2502626 | 35599.8 |
| Trna-met | Not Available | Not Available | Positive | 2502911 - 2502984 | Not Available |
| calcium-translocating p-type atpase, pmca-type | DW204_10465 | Not Available | Positive | 2503147 - 2505774 | 96372.8 |
| had family phosphatase | DW204_10470 | Not Available | Positive | 2505771 - 2506394 | 24194.2 |
| riboflavin biosynthesis protein ribf | DW204_10475 | Not Available | Positive | 2506395 - 2507327 | 35019.3 |
| atp-dependent rna helicase | DW204_10480 | Not Available | Positive | 2507387 - 2509276 | 71438.3 |
| duf3467 domain-containing protein | DW204_10485 | Not Available | Positive | 2509479 - 2509802 | 12052.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

