Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | DW204_10380 | Not Available | Negative | 2482542 - 2483003 | 17304.0 |
| duf1599 domain-containing protein | DW204_10390 | Not Available | Negative | 2485212 - 2485754 | 20784.2 |
| lysm peptidoglycan-binding domain-containing protein | DW204_10395 | Not Available | Negative | 2485899 - 2486807 | 33878.9 |
| duf3256 family protein | DW204_10400 | Not Available | Negative | 2487104 - 2487772 | 25115.2 |
| response regulator | DW204_10405 | Not Available | Negative | 2487837 - 2490614 | 104406.0 |
| carbohydrate kinase | DW204_10410 | Not Available | Negative | 2490939 - 2491820 | 32045.5 |
| mfs transporter | DW204_10415 | Not Available | Negative | 2491825 - 2492985 | 41908.0 |
| alpha-galactosidase | DW204_10420 | Not Available | Negative | 2493045 - 2495237 | 83166.5 |
| duf4980 domain-containing protein | DW204_10425 | Not Available | Negative | 2495261 - 2497132 | 70443.3 |
| hypothetical protein | DW204_10430 | Not Available | Negative | 2497248 - 2497620 | 14524.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

