Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate transporter | DW204_00890 | Not Available | Negative | 247089 - 248399 | 45996.1 |
| hypothetical protein | DW204_00895 | Not Available | Negative | 248894 - 249511 | 23757.7 |
| hypothetical protein | DW204_00900 | Not Available | Positive | 249820 - 250380 | 21108.0 |
| type i restriction-modification system subunit m | DW204_00905 | Not Available | Positive | 250388 - 251917 | 57352.7 |
| fic family protein | DW204_00910 | Not Available | Positive | 251930 - 253243 | 50533.4 |
| hypothetical protein | DW204_00915 | Not Available | Positive | 253262 - 253453 | 7035.18 |
| restriction endonuclease subunit s | DW204_00920 | Not Available | Positive | 253416 - 254696 | 47590.8 |
| slatt domain-containing protein | DW204_00925 | Not Available | Positive | 254707 - 255447 | 29611.6 |
| haloacid dehalogenase-like hydrolase | DW204_00930 | Not Available | Positive | 255444 - 256304 | 32779.5 |
| duf3800 domain-containing protein | DW204_00935 | Not Available | Positive | 256325 - 257074 | 29600.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

