Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_10280 | Not Available | Negative | 2458472 - 2458741 | 9910.96 |
| site-specific integrase | DW204_10285 | Not Available | Negative | 2459041 - 2460240 | 45998.1 |
| Tmrna,resume consensus sequence (at 88): attatctggcaacgaaaa | Not Available | Not Available | Positive | 2460494 - 2460888 | Not Available |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | DW204_10295 | Not Available | Negative | 2461015 - 2462193 | 44027.5 |
| carbonic anhydrase | DW204_10300 | Not Available | Positive | 2462351 - 2462899 | 20568.9 |
| inorganic phosphate transporter | DW204_10305 | Not Available | Negative | 2462960 - 2465254 | 85060.2 |
| imp cyclohydrolase | DW204_10310 | Not Available | Positive | 2465499 - 2466092 | 21904.3 |
| rod shape-determining protein | DW204_10315 | Not Available | Positive | 2466165 - 2467187 | 36950.9 |
| rod shape-determining protein mrec | DW204_10320 | Not Available | Positive | 2467276 - 2468127 | 31658.7 |
| rod shape-determining protein mred | DW204_10325 | Not Available | Positive | 2468158 - 2468655 | 19128.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

