Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DW204_09875 | Not Available | Positive | 2402284 - 2402733 | 17140.6 |
| dihydroorotate dehydrogenase electron transfer subunit | DW204_09880 | Not Available | Positive | 2402828 - 2403604 | 28291.8 |
| dihydroorotate dehydrogenase | DW204_09885 | Not Available | Positive | 2403592 - 2404503 | 32258.3 |
| hypothetical protein | DW204_09890 | Not Available | Positive | 2404951 - 2405139 | 7172.99 |
| hypothetical protein | DW204_09895 | Not Available | Negative | 2405241 - 2405759 | 19938.2 |
| type ii toxin-antitoxin system hicb family antitoxin | DW204_09900 | Not Available | Negative | 2405984 - 2406388 | 15451.3 |
| type ii toxin-antitoxin system hica family toxin | DW204_09905 | Not Available | Negative | 2406447 - 2406632 | 7121.77 |
| hypothetical protein | DW204_09910 | Not Available | Negative | 2406946 - 2407329 | 13625.3 |
| hypothetical protein | DW204_09915 | Not Available | Negative | 2407413 - 2407964 | 20216.6 |
| hypothetical protein | DW204_09920 | Not Available | Negative | 2407966 - 2408358 | 14991.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

