Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DW204_09775 | Not Available | Negative | 2381528 - 2382733 | 43465.5 |
| 3'-5' exonuclease | DW204_09780 | Not Available | Negative | 2382746 - 2383522 | 29378.8 |
| dna polymerase iii subunit beta | DW204_09785 | Not Available | Negative | 2383547 - 2384671 | 41476.6 |
| duf3127 domain-containing protein | DW204_09790 | Not Available | Positive | 2384848 - 2385219 | 14117.6 |
| dna adenine methylase | DW204_09795 | Not Available | Positive | 2385894 - 2386832 | 36517.2 |
| restriction endonuclease | DW204_09800 | Not Available | Positive | 2386829 - 2387659 | 31602.8 |
| hypothetical protein | DW204_09805 | Not Available | Positive | 2387663 - 2388988 | 50646.5 |
| site-specific dna-methyltransferase | DW204_09810 | Not Available | Positive | 2389006 - 2389896 | 34244.8 |
| blai/meci/copy family transcriptional regulator | DW204_09815 | Not Available | Positive | 2390071 - 2390445 | 14466.2 |
| m56 family peptidase | DW204_09820 | Not Available | Positive | 2390459 - 2392354 | 70756.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

