Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4286 family protein | DW204_09725 | Not Available | Positive | 2369232 - 2369537 | 11954.5 |
| crossover junction endodeoxyribonuclease ruvc | DW204_09730 | Not Available | Positive | 2369534 - 2370103 | 20855.9 |
| type i pullulanase | DW204_09735 | Not Available | Positive | 2370116 - 2372116 | 74453.9 |
| atp-binding cassette domain-containing protein | DW204_09740 | Not Available | Positive | 2372166 - 2373617 | 54837.4 |
| helix-turn-helix domain-containing protein | DW204_09745 | Not Available | Negative | 2373700 - 2374197 | 18958.7 |
| fimbrillin family protein | DW204_09750 | Not Available | Positive | 2374447 - 2376267 | 69688.6 |
| nitronate monooxygenase | DW204_09755 | Not Available | Negative | 2376393 - 2377343 | 34473.6 |
| serine protease | DW204_09760 | Not Available | Negative | 2377353 - 2379056 | 63178.2 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DW204_09765 | Not Available | Negative | 2379086 - 2379835 | 27404.2 |
| dna repair protein recn | DW204_09770 | Not Available | Negative | 2379854 - 2381521 | 62016.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

