Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | DW204_09675 | Not Available | Negative | 2356425 - 2357747 | 49926.4 |
| transcription termination factor rho | DW204_09680 | Not Available | Negative | 2357929 - 2359962 | 75078.8 |
| rida family protein | DW204_09685 | Not Available | Positive | 2360261 - 2360638 | 13253.1 |
| hypothetical protein | DW204_09690 | Not Available | Positive | 2360715 - 2361923 | 45688.6 |
| mbl fold metallo-hydrolase | DW204_09695 | Not Available | Positive | 2361936 - 2362682 | 28486.8 |
| lactoylglutathione lyase | DW204_09700 | Not Available | Positive | 2362695 - 2363072 | 14644.2 |
| duf3805 domain-containing protein | DW204_09705 | Not Available | Positive | 2363107 - 2363931 | 31210.6 |
| atp-binding cassette domain-containing protein | DW204_09710 | Not Available | Positive | 2363972 - 2365837 | 72287.5 |
| long-chain fatty acid--coa ligase | DW204_09715 | Not Available | Negative | 2365982 - 2367634 | 62502.0 |
| na+/h+ antiporter nhac family protein | DW204_09720 | Not Available | Positive | 2367872 - 2369176 | 46390.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

