Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | DW204_09570 | Not Available | Positive | 2332043 - 2333062 | 38522.0 |
| mfs transporter | DW204_09575 | Not Available | Positive | 2333176 - 2334375 | 43711.3 |
| hypothetical protein | DW204_09580 | Not Available | Negative | 2334382 - 2335521 | 42736.2 |
| tetratricopeptide repeat protein | DW204_09585 | Not Available | Negative | 2335600 - 2336421 | 31568.4 |
| hypothetical protein | DW204_09590 | Not Available | Negative | 2336753 - 2337562 | 31205.6 |
| hypothetical protein | DW204_09595 | Not Available | Negative | 2337564 - 2338493 | 36267.4 |
| hypothetical protein | DW204_09600 | Not Available | Negative | 2338747 - 2341632 | 112910.0 |
| mobilization protein | DW204_09610 | Not Available | Negative | 2341917 - 2343224 | 50735.5 |
| dna primase | DW204_09615 | Not Available | Negative | 2343491 - 2344462 | 37302.8 |
| hypothetical protein | DW204_09620 | Not Available | Negative | 2344459 - 2344683 | 8815.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

