Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DW204_09510 | Not Available | Negative | 2318067 - 2318960 | 33406.7 |
| tolc family protein | DW204_09525 | Not Available | Negative | 2320513 - 2321688 | 44377.1 |
| acrb/acrd/acrf family protein | DW204_09530 | Not Available | Negative | 2321685 - 2324798 | 113714.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW204_09535 | Not Available | Negative | 2324811 - 2325965 | 41699.5 |
| hypothetical protein | DW204_09540 | Not Available | Negative | 2326047 - 2326469 | 15648.7 |
| peptidylprolyl isomerase | DW204_09545 | Not Available | Negative | 2326878 - 2327552 | 25001.6 |
| glycine--trna ligase | DW204_09550 | Not Available | Negative | 2327567 - 2329108 | 59463.0 |
| mbl fold metallo-hydrolase | DW204_09555 | Not Available | Negative | 2329217 - 2330014 | 29973.2 |
| udp-n-acetylmuramate dehydrogenase | DW204_09560 | Not Available | Negative | 2330011 - 2331036 | 38243.9 |
| duf4348 domain-containing protein | DW204_09565 | Not Available | Negative | 2331043 - 2331897 | 33680.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

