Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | DW204_09455 | Not Available | Positive | 2306016 - 2306912 | 32565.7 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DW204_09460 | Not Available | Positive | 2306945 - 2307418 | 18174.2 |
| lysm peptidoglycan-binding domain-containing protein | DW204_09465 | Not Available | Negative | 2307424 - 2308314 | 34444.5 |
| cytidine deaminase | DW204_09470 | Not Available | Positive | 2308456 - 2308935 | 17756.2 |
| tonb-dependent receptor | DW204_09480 | Not Available | Positive | 2309871 - 2312156 | 87109.0 |
| Trna-lys | Not Available | Not Available | Positive | 2312342 - 2312414 | Not Available |
| abc transporter atp-binding protein | DW204_09490 | Not Available | Negative | 2312539 - 2314182 | 62458.3 |
| hypothetical protein | DW204_09495 | Not Available | Negative | 2314245 - 2315204 | 36787.1 |
| u32 family peptidase | DW204_09500 | Not Available | Negative | 2315201 - 2317042 | 69448.5 |
| homoserine o-succinyltransferase | DW204_09505 | Not Available | Negative | 2317042 - 2317965 | 36043.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

