Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | DW204_09355 | Not Available | Positive | 2288190 - 2288948 | 28054.9 |
| hypothetical protein | DW204_09360 | Not Available | Negative | 2288943 - 2289269 | 12594.1 |
| duf4296 domain-containing protein | DW204_09365 | Not Available | Negative | 2289275 - 2290135 | 32915.4 |
| lipoprotein signal peptidase | DW204_09370 | Not Available | Negative | 2290132 - 2290770 | 24264.9 |
| trar/dksa family transcriptional regulator | DW204_09375 | Not Available | Negative | 2290891 - 2291271 | 14347.1 |
| isoleucine--trna ligase | DW204_09380 | Not Available | Negative | 2291335 - 2294823 | 132138.0 |
| arsenate reductase arsc | DW204_09385 | Not Available | Negative | 2294951 - 2295415 | 16848.9 |
| hypothetical protein | DW204_09390 | Not Available | Negative | 2295447 - 2295650 | 7456.17 |
| thioredoxin | DW204_09395 | Not Available | Negative | 2295663 - 2296124 | 17273.0 |
| arsr family transcriptional regulator | DW204_09400 | Not Available | Negative | 2296187 - 2296513 | 12450.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

