Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spoiid/lytb domain-containing protein | DW204_09305 | Not Available | Positive | 2275064 - 2276374 | 49773.9 |
| mfs transporter | DW204_09310 | Not Available | Positive | 2276387 - 2277655 | 47479.8 |
| lysr family transcriptional regulator | DW204_09315 | Not Available | Negative | 2277678 - 2278574 | 33853.0 |
| hypothetical protein | DW204_09320 | Not Available | Negative | 2278587 - 2279168 | 21545.0 |
| hypothetical protein | DW204_09325 | Not Available | Negative | 2279208 - 2279588 | 14182.1 |
| atp-dependent chaperone clpb | DW204_09330 | Not Available | Positive | 2279997 - 2282585 | 97254.6 |
| glycoside hydrolase family 25 protein | DW204_09335 | Not Available | Negative | 2282699 - 2283613 | 35752.8 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | DW204_09340 | Not Available | Negative | 2283775 - 2285418 | 59872.8 |
| hypothetical protein | DW204_09345 | Not Available | Negative | 2285523 - 2285759 | 9334.3 |
| hypothetical protein | DW204_09350 | Not Available | Negative | 2285776 - 2288085 | 89386.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

