Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine exporter lyso family protein | DW204_00780 | Not Available | Negative | 223791 - 224423 | 22676.6 |
| duf340 domain-containing protein | DW204_00785 | Not Available | Negative | 224420 - 224698 | 9781.69 |
| acrb/acrd/acrf family protein | DW204_00800 | Not Available | Negative | 226989 - 227384 | 14503.4 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW204_00805 | Not Available | Negative | 227314 - 228324 | 37093.7 |
| biotin/lipoyl-binding protein | DW204_00810 | Not Available | Negative | 228337 - 228723 | 14242.3 |
| arac family transcriptional regulator | DW204_00815 | Not Available | Positive | 228933 - 229850 | 35290.5 |
| duf4301 family protein | DW204_00820 | Not Available | Negative | 229932 - 231455 | 56862.9 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DW204_00825 | Not Available | Positive | 231591 - 233801 | 85032.8 |
| duf1573 domain-containing protein | DW204_00830 | Not Available | Positive | 233904 - 234308 | 14627.7 |
| oligopeptide transporter, opt family | DW204_00835 | Not Available | Positive | 234602 - 236590 | 70318.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

