Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar mfs transporter | DW204_09255 | Not Available | Negative | 2263780 - 2264985 | 44365.2 |
| had family hydrolase | DW204_09260 | Not Available | Negative | 2264999 - 2265721 | 27186.5 |
| upf0104 family protein | DW204_09265 | Not Available | Negative | 2265714 - 2266721 | 38486.2 |
| cdp-alcohol phosphatidyltransferase family protein | DW204_09270 | Not Available | Negative | 2266721 - 2267668 | 37269.4 |
| hypothetical protein | DW204_09275 | Not Available | Negative | 2267668 - 2268534 | 32572.8 |
| ndp-sugar synthase | DW204_09280 | Not Available | Negative | 2268597 - 2269304 | 26509.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DW204_09285 | Not Available | Negative | 2269306 - 2270400 | 40335.3 |
| duf4837 family protein | DW204_09290 | Not Available | Negative | 2270403 - 2271467 | 40880.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DW204_09295 | Not Available | Negative | 2271481 - 2272539 | 39956.2 |
| duf4922 domain-containing protein | DW204_09300 | Not Available | Positive | 2272626 - 2275058 | 92485.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

