Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_09200 | Not Available | Negative | 2250209 - 2250763 | 21419.8 |
| metallophosphoesterase | DW204_09210 | Not Available | Negative | 2253173 - 2254846 | 63918.9 |
| dinitrogenase iron-molybdenum cofactor biosynthesis protein | DW204_09215 | Not Available | Negative | 2255113 - 2255490 | 13245.8 |
| valine--trna ligase | DW204_09220 | Not Available | Positive | 2255663 - 2258341 | 101835.0 |
| hypothetical protein | DW204_09225 | Not Available | Negative | 2258417 - 2259304 | 33319.7 |
| hypothetical protein | DW204_09230 | Not Available | Negative | 2259332 - 2259778 | 17284.1 |
| hypothetical protein | DW204_09235 | Not Available | Negative | 2259791 - 2260258 | 18113.4 |
| sigma-70 family rna polymerase sigma factor | DW204_09240 | Not Available | Negative | 2260255 - 2260761 | 19775.9 |
| hypothetical protein | DW204_09245 | Not Available | Positive | 2260760 - 2260963 | 7692.42 |
| rlua family pseudouridine synthase | DW204_09250 | Not Available | Positive | 2261826 - 2263445 | 61596.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

