Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-dependent translational throttle protein etta | DW204_09040 | Not Available | Negative | 2227726 - 2229414 | 63979.5 |
| mfs transporter | DW204_09045 | Not Available | Negative | 2229434 - 2230555 | 41758.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DW204_09050 | Not Available | Negative | 2230663 - 2231484 | 29546.1 |
| had family hydrolase | DW204_09055 | Not Available | Negative | 2231549 - 2232196 | 24431.2 |
| divalent metal cation transporter | DW204_09065 | Not Available | Negative | 2233322 - 2234584 | 46036.0 |
| hypothetical protein | DW204_09070 | Not Available | Negative | 2234662 - 2235930 | 47152.6 |
| hypothetical protein | DW204_09075 | Not Available | Negative | 2235936 - 2236310 | 14271.2 |
| rna polymerase sigma factor rpod/siga | DW204_09080 | Not Available | Negative | 2236509 - 2237369 | 32835.4 |
| pdz domain-containing protein | DW204_09085 | Not Available | Negative | 2237626 - 2239122 | 53332.8 |
| yihy/virulence factor brkb family protein | DW204_09095 | Not Available | Positive | 2239812 - 2241128 | 49720.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

