Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_08825 | Not Available | Positive | 2165311 - 2165784 | 17840.2 |
| hypothetical protein | DW204_08830 | Not Available | Negative | 2166330 - 2167565 | 47853.7 |
| Trna-thr | Not Available | Not Available | Positive | 2167779 - 2167854 | Not Available |
| alpha-n-arabinofuranosidase | DW204_08845 | Not Available | Positive | 2168080 - 2169156 | 40893.2 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit | DW204_08850 | Not Available | Positive | 2169504 - 2170580 | 40085.6 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DW204_08855 | Not Available | Positive | 2170604 - 2173831 | 119684.0 |
| type ii crispr rna-guided endonuclease cas9 | DW204_08860 | Not Available | Positive | 2174108 - 2178604 | 175488.0 |
| type ii crispr-associated endonuclease cas1 | DW204_08865 | Not Available | Positive | 2178601 - 2179527 | 34869.3 |
| crispr-associated endonuclease cas2 | DW204_08870 | Not Available | Positive | 2179527 - 2179859 | 12857.6 |
| duf1735 domain-containing protein | DW204_08875 | Not Available | Negative | 2182246 - 2183424 | 44144.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

