Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW204_00730 | Not Available | Positive | 211463 - 214507 | 112502.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_00735 | Not Available | Positive | 214521 - 216308 | 67871.2 |
| hypothetical protein | DW204_00740 | Not Available | Negative | 216446 - 216669 | 8879.74 |
| hypothetical protein | DW204_00745 | Not Available | Negative | 216866 - 217315 | 16973.1 |
| smi1/knr4 family protein | DW204_00750 | Not Available | Negative | 217362 - 217949 | 22655.1 |
| haloacid dehalogenase | DW204_00755 | Not Available | Negative | 218344 - 219450 | 42534.5 |
| molecular chaperone dnak | DW204_00760 | Not Available | Negative | 219547 - 221463 | 68129.8 |
| pspc domain-containing protein | DW204_00765 | Not Available | Negative | 221654 - 222733 | 39734.1 |
| padr family transcriptional regulator | DW204_00770 | Not Available | Negative | 222746 - 223075 | 12602.2 |
| gnat family n-acetyltransferase | DW204_00775 | Not Available | Positive | 223243 - 223740 | 19567.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

