Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 35 | DW204_08670 | Not Available | Negative | 2133079 - 2135385 | 86811.4 |
| atp-dependent dna helicase recg | DW204_08675 | Not Available | Negative | 2135723 - 2137822 | 80562.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DW204_08680 | Not Available | Negative | 2137822 - 2138490 | 24500.6 |
| dj-1 family protein | DW204_08685 | Not Available | Negative | 2138490 - 2139038 | 19284.9 |
| tonb family protein | DW204_08690 | Not Available | Negative | 2139065 - 2139901 | 29318.1 |
| biopolymer transporter exbd | DW204_08695 | Not Available | Negative | 2139914 - 2140330 | 15726.3 |
| mota/tolq/exbb proton channel family protein | DW204_08700 | Not Available | Negative | 2140337 - 2141056 | 25859.0 |
| pyridoxine 5'-phosphate synthase | DW204_08705 | Not Available | Negative | 2141060 - 2141773 | 26462.6 |
| nad kinase | DW204_08710 | Not Available | Positive | 2141894 - 2142766 | 32720.4 |
| acetyl-coa synthetase | DW204_08715 | Not Available | Negative | 2142847 - 2144502 | 62451.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

