Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DW204_08620 | Not Available | Negative | 2125607 - 2126914 | 47398.8 |
| duf4290 domain-containing protein | DW204_08625 | Not Available | Negative | 2126930 - 2127532 | 23950.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DW204_08630 | Not Available | Negative | 2127590 - 2128279 | 25116.4 |
| yicc family protein | DW204_08635 | Not Available | Positive | 2128484 - 2129359 | 33647.4 |
| guanylate kinase | DW204_08640 | Not Available | Positive | 2129368 - 2129934 | 21137.1 |
| hypothetical protein | DW204_08645 | Not Available | Positive | 2129945 - 2130130 | 6834.97 |
| nicotinate-nucleotide adenylyltransferase | DW204_08650 | Not Available | Positive | 2130109 - 2130702 | 23120.7 |
| metallophosphoesterase | DW204_08655 | Not Available | Negative | 2130703 - 2131539 | 30944.4 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | DW204_08660 | Not Available | Positive | 2131631 - 2132521 | 32558.1 |
| n-acetyltransferase | DW204_08665 | Not Available | Positive | 2132523 - 2133005 | 18577.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

