Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | DW204_08570 | Not Available | Positive | 2112055 - 2112504 | 17192.7 |
| hypothetical protein | DW204_08575 | Not Available | Negative | 2112552 - 2113376 | 30459.7 |
| hd domain-containing protein | DW204_08580 | Not Available | Positive | 2113705 - 2115135 | 54707.1 |
| anaerobic ribonucleoside triphosphate reductase | DW204_08585 | Not Available | Positive | 2115615 - 2117999 | 90037.2 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | DW204_08590 | Not Available | Positive | 2118017 - 2118478 | 17573.0 |
| s9 family peptidase | DW204_08595 | Not Available | Negative | 2119173 - 2121566 | 91818.4 |
| rip metalloprotease rsep | DW204_08600 | Not Available | Negative | 2121677 - 2123017 | 50835.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DW204_08605 | Not Available | Negative | 2123057 - 2124214 | 42324.4 |
| m23 family peptidase | DW204_08610 | Not Available | Negative | 2124220 - 2125077 | 32040.5 |
| 16s rrna processing protein rimm | DW204_08615 | Not Available | Negative | 2125092 - 2125604 | 19580.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

