Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | DW204_08520 | Not Available | Negative | 2099613 - 2100422 | 30953.1 |
| Trna-leu | Not Available | Not Available | Positive | 2100598 - 2100681 | Not Available |
| mannose-1-phosphate guanylyltransferase | DW204_08530 | Not Available | Positive | 2100848 - 2101891 | 39946.7 |
| tonb-dependent receptor | DW204_08535 | Not Available | Negative | 2101975 - 2104350 | 89062.5 |
| hit family protein | DW204_08540 | Not Available | Negative | 2104464 - 2104871 | 15103.3 |
| transcription elongation factor grea | DW204_08545 | Not Available | Negative | 2104925 - 2105389 | 16737.4 |
| duf4369 domain-containing protein | DW204_08550 | Not Available | Negative | 2105676 - 2106821 | 42561.6 |
| polyribonucleotide nucleotidyltransferase | DW204_08555 | Not Available | Positive | 2107068 - 2109251 | 80539.9 |
| iron-containing alcohol dehydrogenase | DW204_08560 | Not Available | Positive | 2109408 - 2110580 | 42860.9 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DW204_08565 | Not Available | Negative | 2110651 - 2111934 | 47136.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

