Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol kinase family lipid kinase | DW204_08455 | Not Available | Negative | 2087704 - 2088738 | 38067.1 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DW204_08460 | Not Available | Positive | 2088963 - 2090150 | 44351.3 |
| ferredoxin | DW204_08465 | Not Available | Positive | 2090425 - 2090958 | 19368.2 |
| had family phosphatase | DW204_08470 | Not Available | Negative | 2090945 - 2091754 | 30482.1 |
| hypothetical protein | DW204_08475 | Not Available | Positive | 2092294 - 2092713 | 16852.7 |
| mobilization protein | DW204_08490 | Not Available | Positive | 2093498 - 2093941 | 17936.8 |
| tolc family protein | DW204_08500 | Not Available | Positive | 2094455 - 2095780 | 50758.7 |
| hlyd family secretion protein | DW204_08505 | Not Available | Positive | 2095832 - 2096926 | 40620.7 |
| mfs transporter | DW204_08510 | Not Available | Positive | 2096931 - 2098571 | 62404.4 |
| arac family transcriptional regulator | DW204_08515 | Not Available | Positive | 2098609 - 2099481 | 33488.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

