Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | DW204_08390 | Not Available | Negative | 2071576 - 2074113 | 95356.8 |
| hypothetical protein | DW204_08395 | Not Available | Negative | 2074119 - 2074322 | 8166.34 |
| dna gyrase subunit a | DW204_08400 | Not Available | Positive | 2074359 - 2076905 | 95895.8 |
| hypothetical protein | DW204_08405 | Not Available | Positive | 2076954 - 2078171 | 45299.7 |
| hypothetical protein | DW204_08420 | Not Available | Positive | 2080086 - 2080301 | 8202.75 |
| nadph-flavin oxidoreductase | DW204_08430 | Not Available | Positive | 2080911 - 2081906 | 37037.8 |
| yjgp/yjgq family permease | DW204_08435 | Not Available | Negative | 2081983 - 2083158 | 45522.9 |
| trna guanosine(34) transglycosylase tgt | DW204_08440 | Not Available | Negative | 2083180 - 2084310 | 42563.3 |
| endopeptidase la | DW204_08445 | Not Available | Negative | 2084307 - 2086790 | 93083.8 |
| methyltransferase domain-containing protein | DW204_08450 | Not Available | Positive | 2086977 - 2087693 | 26519.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

