Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucuronate isomerase | DW204_08335 | Not Available | Negative | 2057157 - 2058563 | 54302.4 |
| tagaturonate reductase | DW204_08340 | Not Available | Positive | 2058876 - 2060315 | 54018.5 |
| hypothetical protein | DW204_08345 | Not Available | Positive | 2060451 - 2061239 | 30303.5 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DW204_08350 | Not Available | Negative | 2061221 - 2061613 | 14988.0 |
| prolipoprotein diacylglyceryl transferase | DW204_08355 | Not Available | Negative | 2061606 - 2062433 | 31747.5 |
| dmt family transporter | DW204_08360 | Not Available | Negative | 2062560 - 2063486 | 33699.8 |
| thiol:disulfide interchange protein | DW204_08370 | Not Available | Positive | 2064382 - 2066607 | 84493.5 |
| dead/deah box helicase | DW204_08375 | Not Available | Negative | 2066752 - 2068026 | 47576.6 |
| phosphoserine phosphatase serb | DW204_08380 | Not Available | Negative | 2068047 - 2069279 | 45822.7 |
| molecular chaperone htpg | DW204_08385 | Not Available | Negative | 2069405 - 2071456 | 78380.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

