Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | DW204_08280 | Not Available | Positive | 2047924 - 2048562 | 22950.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | DW204_08285 | Not Available | Positive | 2048599 - 2049222 | 22312.3 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | DW204_08290 | Not Available | Positive | 2049241 - 2050509 | 46708.7 |
| hypothetical protein | DW204_08295 | Not Available | Positive | 2050834 - 2051199 | 13789.6 |
| excinuclease abc subunit uvrb | DW204_08305 | Not Available | Negative | 2052049 - 2054091 | 78146.1 |
| outer membrane protein assembly factor bamd | DW204_08310 | Not Available | Positive | 2054245 - 2055081 | 32255.1 |
| rna polymerase rpb6 | DW204_08315 | Not Available | Positive | 2055110 - 2055445 | 13004.4 |
| duf4293 family protein | DW204_08320 | Not Available | Positive | 2055571 - 2056026 | 17418.1 |
| mbl fold metallo-hydrolase | DW204_08325 | Not Available | Negative | 2056111 - 2056917 | 30448.4 |
| hypothetical protein | DW204_08330 | Not Available | Positive | 2056962 - 2057141 | 6908.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

