Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DW204_08230 | Not Available | Negative | 2030330 - 2031217 | 33278.6 |
| agmatine deiminase family protein | DW204_08235 | Not Available | Negative | 2031214 - 2032251 | 39358.5 |
| translocation/assembly module tamb | DW204_08240 | Not Available | Negative | 2032264 - 2036829 | 171395.0 |
| na+/h+ antiporter nhac | DW204_08245 | Not Available | Positive | 2037087 - 2038532 | 51183.0 |
| aminopeptidase | DW204_08250 | Not Available | Positive | 2038562 - 2039956 | 52539.0 |
| susc/raga family tonb-linked outer membrane protein | DW204_08255 | Not Available | Positive | 2040095 - 2042845 | 101599.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_08260 | Not Available | Positive | 2042856 - 2044487 | 62058.0 |
| na(+)-translocating nadh-quinone reductase subunit a | DW204_08265 | Not Available | Positive | 2044661 - 2046013 | 49390.8 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | DW204_08270 | Not Available | Positive | 2046039 - 2047214 | 42504.4 |
| na(+)-translocating nadh-quinone reductase subunit c | DW204_08275 | Not Available | Positive | 2047229 - 2047909 | 24518.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

