Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2520 domain-containing protein | DW204_08180 | Not Available | Negative | 2020418 - 2021215 | 29973.9 |
| hypothetical protein | DW204_08185 | Not Available | Negative | 2021212 - 2021547 | 12272.7 |
| nad(p)h nitroreductase | DW204_08190 | Not Available | Negative | 2021547 - 2022083 | 19992.0 |
| gnat family n-acetyltransferase | DW204_08195 | Not Available | Positive | 2022159 - 2023133 | 38151.2 |
| methylmalonyl-coa epimerase | DW204_08200 | Not Available | Positive | 2023299 - 2023703 | 14526.6 |
| acyl-coa carboxylase subunit beta | DW204_08205 | Not Available | Positive | 2023753 - 2025306 | 56425.9 |
| lamin tail domain-containing protein | DW204_08210 | Not Available | Positive | 2025332 - 2026261 | 34405.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DW204_08215 | Not Available | Positive | 2026284 - 2026712 | 15265.7 |
| sodium ion-translocating decarboxylase subunit beta | DW204_08220 | Not Available | Positive | 2026715 - 2027875 | 40907.3 |
| trkh family potassium uptake protein | DW204_08225 | Not Available | Positive | 2028758 - 2030263 | 55542.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

