Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DW204_08130 | Not Available | Positive | 2013205 - 2013903 | 26812.5 |
| marr family transcriptional regulator | DW204_08135 | Not Available | Negative | 2014345 - 2014791 | 17430.3 |
| 30s ribosomal protein s6 | DW204_08140 | Not Available | Positive | 2014997 - 2015344 | 13588.4 |
| 30s ribosomal protein s18 | DW204_08145 | Not Available | Positive | 2015347 - 2015616 | 10561.2 |
| 50s ribosomal protein l9 | DW204_08150 | Not Available | Positive | 2015635 - 2016084 | 16203.9 |
| hypothetical protein | DW204_08155 | Not Available | Negative | 2016439 - 2016639 | 6468.49 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DW204_08160 | Not Available | Positive | 2016943 - 2018259 | 48904.8 |
| glycosyltransferase family 2 protein | DW204_08165 | Not Available | Positive | 2018256 - 2019278 | 39203.0 |
| septum formation protein maf | DW204_08170 | Not Available | Negative | 2019275 - 2019871 | 22692.4 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DW204_08175 | Not Available | Negative | 2019881 - 2020399 | 19033.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

