Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s41 | DW204_08030 | Not Available | Negative | 1987643 - 1989013 | 51011.4 |
| hypothetical protein | DW204_08035 | Not Available | Negative | 1989070 - 1989939 | 33291.1 |
| hypothetical protein | DW204_08040 | Not Available | Negative | 1990009 - 1991748 | 64255.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DW204_08045 | Not Available | Positive | 1991882 - 1992640 | 29569.1 |
| mrp family atp-binding protein | DW204_08050 | Not Available | Positive | 1992660 - 1993757 | 39398.8 |
| dna polymerase iv | DW204_08055 | Not Available | Negative | 1994203 - 1995309 | 41878.7 |
| threonylcarbamoyl-amp synthase | DW204_08060 | Not Available | Positive | 1995434 - 1996000 | 20736.1 |
| cbs domain-containing protein | DW204_08065 | Not Available | Positive | 1996013 - 1997812 | 66453.1 |
| methionyl-trna formyltransferase | DW204_08070 | Not Available | Positive | 1997828 - 1998799 | 36077.9 |
| hypothetical protein | DW204_08075 | Not Available | Negative | 1998815 - 1999534 | 26711.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

