Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility lipoprotein gldb | DW204_07980 | Not Available | Positive | 1975212 - 1976204 | 38987.1 |
| sam-dependent methyltransferase | DW204_07985 | Not Available | Positive | 1976224 - 1976928 | 26102.0 |
| hypothetical protein | DW204_07990 | Not Available | Negative | 1976932 - 1978002 | 40998.1 |
| lipoyl synthase | DW204_07995 | Not Available | Negative | 1977977 - 1978825 | 31597.0 |
| s9 family peptidase | DW204_08000 | Not Available | Negative | 1978903 - 1981101 | 83315.1 |
| energy transducer tonb | DW204_08005 | Not Available | Negative | 1981126 - 1982439 | 48818.5 |
| abc transporter permease | DW204_08010 | Not Available | Negative | 1982568 - 1983824 | 47345.5 |
| abc transporter permease | DW204_08015 | Not Available | Negative | 1983837 - 1985012 | 43991.6 |
| biotin/lipoyl-binding protein | DW204_08020 | Not Available | Negative | 1985019 - 1986002 | 35874.2 |
| tolc family protein | DW204_08025 | Not Available | Negative | 1986012 - 1987505 | 54546.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

