Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | DW204_07930 | Not Available | Negative | 1963453 - 1964247 | 30609.6 |
| rrna cytosine-c5-methyltransferase | DW204_07935 | Not Available | Positive | 1964322 - 1965734 | 52488.8 |
| tolc family protein | DW204_07940 | Not Available | Negative | 1965925 - 1967259 | 50132.3 |
| efflux rnd transporter periplasmic adaptor subunit | DW204_07945 | Not Available | Negative | 1967263 - 1968360 | 40122.2 |
| abc transporter permease | DW204_07950 | Not Available | Negative | 1968396 - 1969640 | 45959.2 |
| abc transporter permease | DW204_07955 | Not Available | Negative | 1969643 - 1970893 | 46137.2 |
| abc transporter atp-binding protein | DW204_07960 | Not Available | Negative | 1970904 - 1971623 | 26732.5 |
| rok family protein | DW204_07965 | Not Available | Positive | 1971772 - 1972746 | 34423.5 |
| duf4861 domain-containing protein | DW204_07970 | Not Available | Negative | 1972806 - 1974029 | 46132.6 |
| enoyl-acp reductase | DW204_07975 | Not Available | Positive | 1974348 - 1975205 | 31309.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

