Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DW204_07630 | Not Available | Negative | 1908870 - 1909628 | 29235.6 |
| histidine kinase | DW204_07635 | Not Available | Negative | 1909625 - 1911610 | 77852.2 |
| paai family thioesterase | DW204_07640 | Not Available | Positive | 1911928 - 1912341 | 14869.1 |
| isochorismate synthase | DW204_07645 | Not Available | Positive | 1912338 - 1913471 | 43123.3 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DW204_07650 | Not Available | Positive | 1913491 - 1915155 | 62840.8 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DW204_07655 | Not Available | Positive | 1915160 - 1915984 | 30464.6 |
| o-succinylbenzoate synthase | DW204_07660 | Not Available | Positive | 1916073 - 1917131 | 39993.1 |
| o-succinylbenzoic acid--coa ligase | DW204_07665 | Not Available | Positive | 1917133 - 1918284 | 42080.0 |
| dna adenine methylase | DW204_07675 | Not Available | Negative | 1919956 - 1920810 | 32832.6 |
| thymidylate synthase | DW204_07680 | Not Available | Negative | 1920906 - 1921550 | 24438.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

