Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DW204_00630 | Not Available | Negative | 178258 - 181311 | 113113.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_00635 | Not Available | Negative | 181766 - 183202 | 53319.1 |
| tonb-dependent receptor | DW204_00640 | Not Available | Negative | 183214 - 186291 | 113858.0 |
| site-specific integrase | DW204_00645 | Not Available | Positive | 186633 - 187796 | 46033.9 |
| susc/raga family tonb-linked outer membrane protein | DW204_00650 | Not Available | Positive | 188219 - 191038 | 103652.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_00655 | Not Available | Positive | 191057 - 192517 | 55611.6 |
| nucleotidyltransferase | DW204_00660 | Not Available | Negative | 192735 - 193640 | 33633.1 |
| hypothetical protein | DW204_00665 | Not Available | Positive | 193757 - 198391 | 171803.0 |
| hypothetical protein | DW204_00670 | Not Available | Positive | 198363 - 200696 | 88907.0 |
| hypothetical protein | DW204_00675 | Not Available | Positive | 200840 - 201202 | 13850.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

