Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW204_07530 | Not Available | Positive | 1876941 - 1878431 | 55155.6 |
| hypothetical protein | DW204_07535 | Not Available | Negative | 1878428 - 1879396 | 36746.4 |
| chloramphenicol acetyltransferase | DW204_07540 | Not Available | Negative | 1879421 - 1880071 | 25067.7 |
| ketopantoate reductase family protein | DW204_07545 | Not Available | Negative | 1880068 - 1880979 | 33091.3 |
| redox-regulated atpase ychf | DW204_07550 | Not Available | Negative | 1880999 - 1882102 | 40965.9 |
| duf3836 domain-containing protein | DW204_07555 | Not Available | Negative | 1882304 - 1882690 | 15068.1 |
| dna polymerase i | DW204_07560 | Not Available | Negative | 1882844 - 1885612 | 104540.0 |
| polyprenyl synthetase family protein | DW204_07565 | Not Available | Positive | 1885707 - 1886681 | 35677.0 |
| hypothetical protein | DW204_07570 | Not Available | Positive | 1887131 - 1888363 | 48212.2 |
| hypothetical protein | DW204_07575 | Not Available | Positive | 1888504 - 1889211 | 27010.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

