Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW204_07480 | Not Available | Negative | 1852701 - 1854797 | 78823.9 |
| tonb-dependent receptor | DW204_07485 | Not Available | Negative | 1854816 - 1857947 | 114995.0 |
| duf4982 domain-containing protein | DW204_07490 | Not Available | Positive | 1858574 - 1861567 | 113102.0 |
| glycoside hydrolase family 2 protein | DW204_07495 | Not Available | Negative | 1861641 - 1864079 | 92201.1 |
| leucine--trna ligase | DW204_07500 | Not Available | Positive | 1864220 - 1867054 | 108033.0 |
| yitt family protein | DW204_07505 | Not Available | Positive | 1867124 - 1868020 | 33466.7 |
| glycoside hydrolase family 2 protein | DW204_07510 | Not Available | Positive | 1868138 - 1870711 | 99155.9 |
| beta-n-acetylhexosaminidase | DW204_07515 | Not Available | Positive | 1870745 - 1873081 | 86785.6 |
| non-canonical purine ntp diphosphatase | DW204_07520 | Not Available | Positive | 1873087 - 1873668 | 21299.2 |
| tonb-dependent receptor | DW204_07525 | Not Available | Positive | 1873849 - 1876926 | 113893.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

